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Publications

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2022

An in-frame deletion mutation in the degron tail of auxin coreceptor IAA2 confers resistance to the herbicide 2,4-D in Sisymbrium orientale
Marcelo RA de Figueiredo, Anita Küpper, Jenna M Malone, Tijana Petrovic, Ana Beatriz TB de Figueiredo, Grace Campagnola, Olve B Peersen, Kasavajhala VSK Prasad, Eric L Patterson, Anireddy SN Reddy, Martin F Kubeš, Richard Napier, Franck E Dayan, Christopher Preston, Todd A Gaines
An in-frame deletion mutation in the degron tail of auxin co-receptor IAA2 confers resistance to the herbicide 2, 4-D in Sisymbrium orientale
Marcelo RA de Figueiredo, Anita Küpper, Jenna M Malone, Tijana Petrovic, Ana Beatriz TB de Figueiredo, Grace Campagnola, Olve B Peersen, Kasavajhala VSK Prasad, Eric L Patterson, Anireddy SN Reddy, Martin F Kubeš, Richard Napier, Christopher Preston, Todd A Gaines
A Review of Chemical Weed Control Practices in Christmas Tree Production in the United States
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GC Gallina, BM Cregg, EL Patterson, D Saha
Mitotic-inhibiting herbicide response variation in goosegrass (Eleusine indica) with a Leu-136-Phe substitution in α-tubulin
Eli C Russell, John M Peppers, Claudia Ann Rutland, Jinesh Patel, Nathan D Hall, Audrey V Gamble, J Scott McElroy
Overexpression of EiKCS confers paraquat‐resistance in rice (Oryza sativa L.) by promoting the polyamine pathway
Q Luo, S Chen, J Zhu, L Ye, ND Hall, S Basak, JS McElroy, Y Chen

2021

Target‐site resistance to trifluralin is more prevalent in annual ryegrass populations from Western Australia
Chen, Jinyi, Qin Yu, Mechelle Owen, Heping Han, Eric Patterson, Chad Sayer, and Stephen Powles
Genomic‐based epidemiology reveals independent origins and gene flow of glyphosate resistance in Bassia scoparia populations across North America.
Ravet, Karl, Crystal D. Sparks, Andrea L. Dixon, Anita Küpper, Eric P. Westra, Dean J. Pettinga, Patrick J. Tranel et al
Identification of Two Eleusine indica (Goosegrass) Biotypes of Cool-Season Turfgrass Resistant to Dithiopyr
Matthew T. Elmore, Katherine H. Diehl, Rong Di, Jinyi Chen, Eric L. Patterson, James T. Brosnan, Robert N. Trigiano, Daniel P. Tuck, Sarah L. Boggess, Steven McDonald
Differential Expression of Genes Associated with Non‐Target Site Resistance in Poa Annua with Target Site Resistance to Acetolactate Synthase Inhibitors
Laforest, Martin, Brahim Soufiane, 
Eric L. Patterson, José J. Vargas, Sarah L. Boggess, Logan C. Houston, Robert N. Trigiano, and James T. Brosnan
Dinitroaniline Herbicide Resistance and Mechanisms in Weeds
Chen, Jinyi, Qin Yu, Eric L. Patterson, Chad Sayer, and Stephen Powles
Environmental cues affecting horseweed (Conyza canadensis) growth types and their sensitivity to glyphosate
 Schramski, John A., Christy L. Sprague, and Eric L. Patterson.
A needle in a seedstack: An improved method for detection of rare alleles in bulk seed testing through KASP.
Brusa, Anthony, 
Eric L. Patterson, Todd A. Gaines, Kevin Dorn, Philip Westra, Crystal D. Sparks, and Don Wyse.
Detection of subgenome bias using an anchored syntenic approach in Eleusine coracana (finger millet)
ND Hall, JD Patel, JS McElroy, LR Goertzen
First genome size assessments for Marshallia and Balduina (Asteraceae, Helenieae) reveal significant cytotype diversity
T Garnatje, J Pellicer, J Vallès, ND Hall, C Hansen, L Goertzen
The impact of polyploidization on the evolution of weed species: historical understanding and current limitations
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CA Rutland, ND Hall, JS McElroy

2020

Impact of Climate Change on Population Dynamics and Herbicide Resistance in Kochia (Bassia scoparia (L.) AJ Scott)
Chen, Jinyi, Erin Burns, Margaret Fleming, and 
Eric Patterson
Diversity of α‐tubulin transcripts in Lolium rigidum.
Chen, Jinyi, Zhizhan Chu, Heping Han, 
Eric L. Patterson, Qin Yu, and Stephen Powles.
Coexpression Clusters and Allele-Specific Expression in Metabolism-Based Herbicide Resistance.
Giacomini, Darci A., Eric L. Patterson, Anita Küpper, Roland Beffa, Todd A. Gaines, and Patrick J. Tranel.

Draft Genomes of Amaranthus tuberculatus, Amaranthus hybridus, and Amaranthus palmeri
Montgomery, Jacob S., Darci Giacomini, Bridgit Waithaka, Christa Lanz, Brent P. Murphy, Ruth Campe, Jens Lerchl, Andreas Landes, Fanny Gatzmann, Antoine Janssen, Rudie Antonise, 
Eric Patterson, Detlef Weigel, Patrick J Tranel. 
Homogeneity among glyphosate-resistant Amaranthus palmeri in geographically distant locations.
Molin, William T., 
Eric L. Patterson, and Christopher A. Saski.
Annual bluegrass (Poa annua) resistance to indaziflam applied early‐postemergence.
 
Brosnan, James T., José J. Vargas, Bruce Spesard, Derek Netzband, John M. Zobel, Jinyi Chen, and Eric L. Patterson

2019

Omics Potential in Herbicide-Resistant Weed Management
Eric L Patterson, Christopher Saski, Anita Küpper, Roland Beffa, and Todd A. Gaines
The Draft Genome of Kochia scoparia and the Mechanism of Glyphosate Resistance via Transposon-Mediated EPSPS Tandem Gene Duplication.
Eric L Patterson, Christopher A Saski, Daniel B Sloan, Patrick J Tranel, Philip Westra, Todd A Gaines
Protoporphyrinogen oxidase (PPO) inhibitor–resistant waterhemp (Amaranthus tuberculatus) from Nebraska is multiple herbicide resistant: confirmation, mechanism of resistance, and management
 Debalin Sarangi, Trey Stephens, Abigail L. Barker, Eric L. Patterson, Todd A. Gaines, and Amit J. Jhala
Predicting herbicide movement across semi-permeable membranes using three phase partitioning
Hudson K Takano, Eric L. Patterson, Scott J. Nissen, Franck E. Dayan, and Todd A. Gaines.
Molecular mechanisms of adaptive evolution revealed by global selection for glyphosate resistance.
Gaines, Todd A., 
Eric L. Patterson, and Paul Neve.

2018

Interspecific and intraspecific transference of metabolism‐based mesotrione resistance in dioecious weedy Amaranthus
Maxwel C. Oliveira, Todd A. Gaines, Eric L. Patterson, Amit J. Jhala, Suat Irmak, Keenan Amundsen, and Stevan Z. Knezevic.
Exploring the fate of mRNA in aging seeds: protection, destruction, or slow decay?.
Margaret B. Fleming, Eric L. Patterson, Patrick A. Reeves, Christopher M. Richards, Todd A. Gaines, and Christina Walters.
The power and potential of genomics in weed biology and management
 Karl Ravet, Eric L. Patterson, Hansjörg Krähmer, Kateřina Hamouzová, Longjiang Fan, Marie Jasieniuk, Amy Lawton‐Rauh et al
Population genetic structure in glyphosate-resistant and-susceptible Palmer amaranth (Amaranthus palmeri) populations using genotyping-by-sequencing (GBS).
Anita Küpper, Harish K. Manmathan, Darci Giacomini, 
Eric L. Patterson, William B. McCloskey, and Todd A. Gaines
Increased chalcone synthase (CHS) expression is associated with dicamba resistance in Kochia scoparia.
Dean J. Pettinga, Junjun Ou, Eric L. Patterson, Mithila Jugulam, Philip Westra, and Todd A. Gaine
Reversing resistance to tembotrione in an Amaranthus tuberculatus (var. rudis) population from Nebraska, USA with cytochrome P450 inhibitors.
Maxwel C. Oliveira, Todd A. Gaines, Franck E. Dayan, Eric L. Patterson, Amit J. Jhala, and Stevan Z. Knezevic

2017

Glyphosate resistance and EPSPS gene duplication: Convergent evolution in multiple plant species
Eric L. Patterson, Dean J. Pettinga, Karl Ravet, Paul Neve, and Todd A. Gaines.
Pollen-mediated gene flow from glyphosate-resistant common waterhemp (Amaranthus rudis Sauer): consequences for the dispersal of resistance genes
 Debalin Sarangi, Andrew J. Tyre, Eric L. Patterson, Todd A. Gaines, Suat Irmak, Stevan Z. Knezevic, John L. Lindquist, and Amit J. Jhala
A KASP Genotyping Method to Identify Northern Watermilfoil, Eurasian Watermilfoil, and Their Interspecific Hybrids
Eric L. Patterson, Margaret B. Fleming, Kallie C. Kessler, Scott J. Nissen, and Todd A. Gaines.
Indaziflam: A New Cellulose Biosynthesis Inhibiting Herbicide Provides Long‐Term Control of Invasive Winter Annual Grasses
Derek J. Sebastian, Margaret B. Fleming, Eric L. Patterson, James R. Sebastian, and Scott J. Nissen
Multiple Resistance to Glyphosate and Acetolactate Synthase Inhibitors in Palmer Amaranth (Amaranthus palmeri) Identified in Brazil.
Anita Küpper, Ednaldo A. Borgato, Eric L. Patterson, Acácio Gonçalves Netto, Marcelo Nicolai, Saul JP de Carvalho, Scott J. Nissen, Todd A. Gaines, and Pedro J. Christoffoleti.

2016

Confirmation and mechanism of glyphosate resistance in tall windmill grass (Chloris elata) from Brazil.
Caio ACG Brunharo, 
Eric L. Patterson, Daniela R. Carrijo, Marcel SC de Melo, Marcelo Nicolai, Todd A. Gaines, Scott J. Nissen, and Pedro J. Christoffoleti.
EPSPS Gene Copy Number and Whole-Plant Glyphosate Resistance Level in Kochia scoparia.
Todd A. Gaines, Abigail L. Barker, Eric L. Patterson, Philip Westra, Eric P. Westra, Robert G. Wilson, Prashant Jha, Vipan Kumar, and Andrew R. Kniss.
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